wgMLST analysis

Whole-genome Multi-Locus Sequence Typing (wgMLST) using BIONUMERICS. See the wgMLST application page for a complete overview.

Whole Genome Sequence tools plugin manual

In this manual you will learn how to install and use the WGS (Whole Genome Sequence) tools plugin in a BIONUMERICS database.

Whole genome MLST typing in BIONUMERICS: routine workflow starting from sequence read sets

This tutorial explains how to prepare your database for wgMLST analysis and how to perform a full wgMLST analysis (de novo assembly, assembly-based and assembly-free calling) in BIONUMERICS on a routine basis starting from sequence read sets. 

Whole genome MLST typing in BIONUMERICS: routine workflow starting from imported genomes

This tutorial explains how to prepare your database for wgMLST analysis and how to perform a wgMLST analysis starting from genomes that are imported in BIONUMERICS.

Whole genome MLST typing in BIONUMERICS: detailed exploration of results

In this tutorial the results from the de novo assembly and allele calling (assembly-free and assembly-based) are discussed into more detail. 

Whole genome MLST typing in the Staphylococcus aureus demonstration database

A tutorial for working with the whole genome Multi Locus Sequence Typing (wgMLST) demonstration database of Staphylococcus aureus, which allows BIONUMERICS users to explore the wgMLST functionality without the need for a wgMLST project or Calculation Engine credits.

Whole genome MLST typing in the Listeria monocytogenes demonstration database

A tutorial for working with the whole genome Multi Locus Sequence Typing (wgMLST) demonstration database of Listeria monocytogenes, which allows BIONUMERICS users to explore the wgMLST functionality without the need for a wgMLST project or Calculation Engine credits.

Whole genome MLST typing in the Brucella demonstration database

A tutorial for working with the whole genome Multi Locus Sequence Typing (wgMLST) demonstration database of Brucella, which allows BIONUMERICS users to explore the wgMLST functionality without the need for a wgMLST project or Calculation Engine credits.

Whole genome MLST typing in BioNumerics: routine workflow starting from imported genomes

This tutorial explains how to prepare your database for wgMLST analysis and how to perform a wgMLST analysis starting from genomes that are imported in BioNumerics.

Info sent to Calculation Engine

What information is sent along when I post a job to the Calculation Engine?

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