Whole genome MLST typing in the Listeria monocytogenes demonstration database

A tutorial for working with the whole genome Multi Locus Sequence Typing (wgMLST) demonstration database of Listeria monocytogenes, which allows BioNumerics users to explore the wgMLST functionality without the need for a wgMLST project or Calculation Engine credits.

wgMLST analysis

Whole-genome Multi-Locus Sequence Typing (wgMLST) using BioNumerics. See the wgMLST application page for a complete overview.
Download PDF file: 
Download demonstration database: 
WGS demo database for Listeria monocytogenes

Demonstration database containing data for a set of 51 Listeria monocytogenes isolates. This database uses publicly available next-generation sequence reads from the Sequence Read Archive (SRA). For each isolate, NGS reads were de novo assembled into genome sequences. wgMLST alleles were called using the assembly-based and assembly-free method.

Note that the downloaded database backup file (.bnbk) can be restored via the Restore database... functionality in the BioNumerics startup screen.

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