Sequence read sets

A sequence read set is designed to hold large sets of short reads generated by next generation sequencing (NGS). Base sequences and their associated quality scores are stored for single-end and paired-end reads, originating from various high-throughput sequencing platforms such as Illumina, Ion Torrent, PacBio, Oxford Nanopore, etc.

Performing a de novo assembly on the cloud calculation engine

This tutorial illustrates how to perform a de novo assembly on the cloud calculation engine.

Performing a de novo assembly locally on your own computer

This tutorial illustrates how to perform a de novo assembly locally on our own computer.

Importing FASTQ files and FASTQ file links

Essentially, there are two ways to import FASTQ files in your BIONUMERICS database: the default import method stores the sequence reads in the BIONUMERICS database and the second import method only imports the links to the location of the FASTQ files. In this tutorial both options are described.

Which trimming pipeline is implemented on the calculation engine?

Which trimming pipeline is implemented on the calculation engine when a read-based job is submitted?

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