GeneMaths XT

GeneMaths XT

GeneMaths XT is a professional software for microarray expression analysis. Its advanced concept of layers and subsets makes it is possible to work with different layers for different data outputs, for example Cy3 and Cy5, standard deviations, error values, etc., as well as different subsets of genes and/or arrays. Also unique is the full error handling through all analysis, mining, and statistics functions. Further features include:

Affymetrix GeneChip Compatible
  • Active History concept: record and repeat all steps of the analysis through history files and templates
  • Reliable data normalization for all types of arrays
  • Interactive querying and pattern matching
  • Easy plot wizard for all types of plots and graphs
  • Unsupervised learning through transversal clustering, hierarchical k-means partitioning, PCA, Discriminant Analysis, Self-organizing maps
  • Supervised learning using neural networks, support-vector machines, k-nearest neighbor
  • Analysis of variance, multivariate analysis, and a large number of statistical tests
  • Special analysis tools for time-course experiments
  • Seamless interaction between all analysis applications
  • Interactivity with databases on the Internet
  • Automation and customization through powerful script language