BioNumerics Plugin Tools

VNTR and MLVA related tools  Import and analysis of VNTR data from Beckman sequencers Tool to import tab-delimited fragment length files from Beckman sequencers, supporting "pooled" VNTR alleles (using Master Mixes).  Calculate and assign VNTR copy numbers Tool to automatically calculate and assign VNTR copy numbers for a set of selected entries, based upon Fingerprint Type fragment patterns.  Show VNTR details for a database entry Tool that pops up a detailed report of VNTR copy numbers and exact fragment lengths for a selected entry. This script works only in conjunction with the tool to calculate and assign VNTR copy numbers (this web page). This script installs a menu VNTR > Show VNTR report in the Entry edit window. As a report, it displays for each VNTR allele the name, the predicted length (as a result of the offset and the copy number) and the observed length.